PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG065680.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 212aa    MW: 22272.2 Da    PI: 10.2791
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG065680.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-1274118147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC7AG065680.6  74 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 118
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSTTPKPLEA GAAAAAVGGG GGDGGGGGGG KGGKGKEQQQ QVAVAAGPPM AVPADAAEDA  60
RMKVRKPYTI TKSRESWTEP EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL  120
KVQKNGTGEH LPPPRPKRKA AHPYPQKASK TAPVASQAVL PQQPAPPPPP PRDQDGVNVS  180
MDASMVVPST NANAVVPSWD NALVQPTQVS HV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.12e-45MYB_related family protein