PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG069100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 217aa    MW: 24029.8 Da    PI: 10.5457
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG069100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP115.43.1e-36170877
                      ----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
               SBP  8 eadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77
                      +adls ak+yhrrhkvCe h+ka+ v ++g++qrfCqqCsrfh ++efD++krsCr+rLa+hn+rrrk+ 
  TRIDC7AG069100.1  1 KADLSGAKHYHRRHKVCEYHAKAALVSAAGKQQRFCQQCSRFHVITEFDQTKRSCRKRLAEHNRRRRKPV 70
                      58******************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
KADLSGAKHY HRRHKVCEYH AKAALVSAAG KQQRFCQQCS RFHVITEFDQ TKRSCRKRLA  60
EHNRRRRKPV ASGAGAVSKD LAVPSRKQNA GGISSSYAGD NNTLSATYTS ATSCLQQGQA  120
RLAAARQMTL ALGVPPEKDR RQQQLSNSMQ LHHHQEQQHF ITSLLHNSNI MSRSSVCSST  180
MPSAAVANSQ VFDQQNDNTN GSNHANNGIH MFEVEFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15269KRSCRKRLAEHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.11e-33SBP family protein