PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG070060.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 743aa    MW: 86208.5 Da    PI: 8.933
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG070060.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.42.7e-2452142290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                        Yn+YA+  GFsvr + +++ k ++e++ r+f+Cskeg+r e+  + t+++r++ra t++gCka+l+++ +  +g+w v+k++  HnH+la
  TRIDC7AG070060.3  52 HYNRYARAKGFSVRLDDKEYVKGTREVKARRFCCSKEGHRLEKYFQaTDQKREPRALTHCGCKAMLEIQHDAgRGQWFVKKFVDVHNHPLA 142
                       6***************************************999877689999********************9****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 743 aa     Download sequence    
LGCAATCQTI ACRIIREQVW RMDGHSASLE EIEEYHMMVS QMFASEKQGY EHYNRYARAK  60
GFSVRLDDKE YVKGTREVKA RRFCCSKEGH RLEKYFQATD QKREPRALTH CGCKAMLEIQ  120
HDAGRGQWFV KKFVDVHNHP LADPDQSAFL RSHRRMNDAH KADAVEYRLG GLRTFQIMNV  180
AKKQNGGYPH VGYICRDLYN FFAKYKKKRI LGRDADFVLN HMRVQEERDA EFFFKYTTDD  240
EGHLRNLFWA DSQSQIDYEA FGDVVVFDST YRVNRYNLPF VAFVGLNHHR STVVFGIGVV  300
SDETHKSYEW LLQTFVEAMG HKEPISVITD GDSAMRKAIR KILPRTDHRL CSWHIEQNMI  360
RHLRNPMLDD FKKLIYCRMG VYQFEKSWAE FKANYEIEEE NEWMSRMYKL RKKLAAAYTK  420
GRYFLGMQSN QHSESLNSRL HNHLDRKMSL VDVVEHTEHC ISRMRRNEAE LDAICSQSVP  480
FTRIDACLLE INAARIYTAK IFKMVRDCIR RSCAWVIQEQ TTVNDLVRYE VVLKDGAEGG  540
SRRLFSVECS FDGSLMNGAF CPCRKMECEA IPCAHIFAVL VFVGAATIPP CCVNKRLTME  600
AKAAFMSVRN ANTHVWSEKM SRYRELRNIA SMALFKVSKS GERSQQVKDY LQSIIDGPIE  660
NDDNTEETTF GPIPSHYSAA SQASAERVLD PKIVDTKGAP CKKRMKPFHE TLRETNRRKK  720
RTRSCGQCKS SEHDRRKCPD LGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1702721KKRMKPFHETLRETNRRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-89FAR1 family protein