PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072430.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 910aa MW: 98342.8 Da PI: 7.9221

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072430.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16.2	2.2e-05	162	184	2	18
zf-NF-X1 2 G......kHkCqklCHeGpCppC 18 G +H Cq CH+GpC++C TRIDC7AG072430.2 162 GhklacaNHACQDVCHPGPCGEC 184 55555559*************** PP
2	zf-NF-X1	18.3	5.1e-06	225	242	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072430.2 225 CGLHRCKGTCHEGECPPC 242 ****************** PP
3	zf-NF-X1	16.8	1.5e-05	430	446	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7AG072430.2 430 CGLHACARPCHPSPCDP 446 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 910 aa Download sequence
YTCFCRRRRD PPNDLYLTPH SCGEPCSKPL DRADPAAKGD DDDVATRCPH LCVLQCHPGP 60 CPPCKAFAPE RPCPCGKQSI TRRCADRITA VTCGQSCEKL LPCGRHHCDK VCHTGPCGEC 120 EVDYPALCFC GKKTETLLCG EMVLKGKLSD KDGVFSCSEV CGHKLACANH ACQDVCHPGP 180 CGECELMPAK VTTCHCGKTR LQEKRTSCLD PIATCDKVCD KRLPCGLHRC KGTCHEGECP 240 PCLVRVEQRC RCGSSGQMVE CYKVSKEEFC CNKPCGRKKN CGRHRCSECC CPLSKPFAQH 300 QGESMDPHFC QIPCGKKLRC GQHGCQHLCH SGHCDPCRET IFNDLSCACG RSSIPPPQPC 360 GTPTPSCPHQ CIVPQPCGHP ASHQCHFGDC PPCVVPVMRE CVGGHVMLRN IPCGSKDIRC 420 NQPCGKNRQC GLHACARPCH PSPCDPPPTN GEASSSSGGK VSCGQLCGVP RRECKHTCNA 480 PCHPSSPCPD VRCEHRATIT CSCGRISTTV PCSAGGAYNG DSTFDISVIQ QLPMPLQPVE 540 SNGKRVPLGQ RKLCCDEECA KVERKRVLAE AFDITQPNLD ALHFGENSNA SDLVSDLFRR 600 EPKWVLAIEE RCKFLVLGKT RGNSSSNMKF HVFCHMMKDK RDAIRLIADR WKLSVQAVGW 660 EPKRFVTVHV TPKSKVPARV LGSKPGVPVS AAHPYFDPMV DMDPRLVVAM LDLPRDADVN 720 SLVLRFGGEC ELVWLNDKNA AAVFSDPARA ATALRRLDYG SAYQGAAMFC PSSITQASLS 780 SNVWVGAPRD GGLAAVSSAS PWKKDSPSEL KPNPHAVMTV LGRAPGTSVL GHSPGSVWKP 840 AVQVTSSNRW NALESDAATS SGSTDKPKPR LRTDTGSSTS APGVGAEPSA GQSVSKLQPD 900 IEVEDWEEIV

Sequence ? help Back to Top

Protein Sequence Length: 910 aa Download sequence

YTCFCRRRRD PPNDLYLTPH SCGEPCSKPL DRADPAAKGD DDDVATRCPH LCVLQCHPGP  60
CPPCKAFAPE RPCPCGKQSI TRRCADRITA VTCGQSCEKL LPCGRHHCDK VCHTGPCGEC  120
EVDYPALCFC GKKTETLLCG EMVLKGKLSD KDGVFSCSEV CGHKLACANH ACQDVCHPGP  180
CGECELMPAK VTTCHCGKTR LQEKRTSCLD PIATCDKVCD KRLPCGLHRC KGTCHEGECP  240
PCLVRVEQRC RCGSSGQMVE CYKVSKEEFC CNKPCGRKKN CGRHRCSECC CPLSKPFAQH  300
QGESMDPHFC QIPCGKKLRC GQHGCQHLCH SGHCDPCRET IFNDLSCACG RSSIPPPQPC  360
GTPTPSCPHQ CIVPQPCGHP ASHQCHFGDC PPCVVPVMRE CVGGHVMLRN IPCGSKDIRC  420
NQPCGKNRQC GLHACARPCH PSPCDPPPTN GEASSSSGGK VSCGQLCGVP RRECKHTCNA  480
PCHPSSPCPD VRCEHRATIT CSCGRISTTV PCSAGGAYNG DSTFDISVIQ QLPMPLQPVE  540
SNGKRVPLGQ RKLCCDEECA KVERKRVLAE AFDITQPNLD ALHFGENSNA SDLVSDLFRR  600
EPKWVLAIEE RCKFLVLGKT RGNSSSNMKF HVFCHMMKDK RDAIRLIADR WKLSVQAVGW  660
EPKRFVTVHV TPKSKVPARV LGSKPGVPVS AAHPYFDPMV DMDPRLVVAM LDLPRDADVN  720
SLVLRFGGEC ELVWLNDKNA AAVFSDPARA ATALRRLDYG SAYQGAAMFC PSSITQASLS  780
SNVWVGAPRD GGLAAVSSAS PWKKDSPSEL KPNPHAVMTV LGRAPGTSVL GHSPGSVWKP  840
AVQVTSSNRW NALESDAATS SGSTDKPKPR LRTDTGSSTS APGVGAEPSA GQSVSKLQPD  900
IEVEDWEEIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072430.2