PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072430.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1077aa MW: 116187 Da PI: 8.006

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072430.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18	6.2e-06	392	409	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072430.4 392 CGLHRCKGTCHEGECPPC 409 ****************** PP
2	zf-NF-X1	16.5	1.8e-05	597	613	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7AG072430.4 597 CGLHACARPCHPSPCDP 613 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1077 aa Download sequence
XXXXXXXXXX XXXXXXNAAP LLPLPNPNPN PASDSRPPRR RQRRPNHNDG RAPPPQERAP 60 PSAPANANAS ASAPAPAAAA GGGAVPQLVQ EIQDKLARGA VECMICYDMV RRSAPVWSCG 120 SCFAIFHLPC IRRWARSPAS ASDDPASDSW RCPGCQSVQD VPARDIAYTC FCRRRRDPPN 180 DLYLTPHSCG EPCSKPLDRA DPAAKGDDDD VATRCPHLCV LQCHPGPCPP CKAFAPERPC 240 PCGKQSITRR CADRITAVTC GQSCEKLLPC GRHHCDKVCH TGPCGECEVD YPALCFCGKK 300 TETLLCGEMV LKGKLSDKDG VFSCSEVCGH KLACANHACQ DVCHPGPCGE CELMPAKVTT 360 CHCGKTRLQE KRTSCLDPIA TCDKVCDKRL PCGLHRCKGT CHEGECPPCL VRVEQRCRCG 420 SSGQMVECYK VSKEEFCCNK PCGRKKNCGR HRCSECCCPL SKPFAQHQGE SMDPHFCQIP 480 CGKKLRCGQH GCQHLCHSGH CDPCRETIFN DLSCACGRSS IPPPQPCGTP TPSCPHQCIV 540 PQPCGHPASH QCHFGDCPPC VVPVMRECVG GHVMLRNIPC GSKDIRCNQP CGKNRQCGLH 600 ACARPCHPSP CDPPPTNGEA SSSSGGKVSC GQLCGVPRRE CKHTCNAPCH PSSPCPDVRC 660 EHRATITCSC GRISTTVPCS AGGAYNGDST FDISVIQQLP MPLQPVESNG KRVPLGQRKL 720 CCDEECAKVE RKRVLAEAFD ITQPNLDALH FGENSNASDL VSDLFRREPK WVLAIEERCK 780 FLVLGKTRGN SSSNMKFHVF CHMMKDKRDA IRLIADRWKL SVQAVGWEPK RFVTVHVTPK 840 SKVPARVLGS KPGVPVSAAH PYFDPMVDMD PRLVVAMLDL PRDADVNSLV LRFGGECELV 900 WLNDKNAAAV FSDPARAATA LRRLDYGSAY QGAAMFCPSS ITQASLSSNV WVGAPRDGGL 960 AAVSSASPWK KDSPSELKPN PHAVMTVLGR APGTSVLGHS PGSVWKPAVQ VTSSNRWNAL 1020 ESDAATSSGS TDKPKPRLRT DTGSSTSAPG VGAEPSAGQS VSKLQPDIEV EDWEEIV

Sequence ? help Back to Top

Protein Sequence Length: 1077 aa Download sequence

XXXXXXXXXX XXXXXXNAAP LLPLPNPNPN PASDSRPPRR RQRRPNHNDG RAPPPQERAP  60
PSAPANANAS ASAPAPAAAA GGGAVPQLVQ EIQDKLARGA VECMICYDMV RRSAPVWSCG  120
SCFAIFHLPC IRRWARSPAS ASDDPASDSW RCPGCQSVQD VPARDIAYTC FCRRRRDPPN  180
DLYLTPHSCG EPCSKPLDRA DPAAKGDDDD VATRCPHLCV LQCHPGPCPP CKAFAPERPC  240
PCGKQSITRR CADRITAVTC GQSCEKLLPC GRHHCDKVCH TGPCGECEVD YPALCFCGKK  300
TETLLCGEMV LKGKLSDKDG VFSCSEVCGH KLACANHACQ DVCHPGPCGE CELMPAKVTT  360
CHCGKTRLQE KRTSCLDPIA TCDKVCDKRL PCGLHRCKGT CHEGECPPCL VRVEQRCRCG  420
SSGQMVECYK VSKEEFCCNK PCGRKKNCGR HRCSECCCPL SKPFAQHQGE SMDPHFCQIP  480
CGKKLRCGQH GCQHLCHSGH CDPCRETIFN DLSCACGRSS IPPPQPCGTP TPSCPHQCIV  540
PQPCGHPASH QCHFGDCPPC VVPVMRECVG GHVMLRNIPC GSKDIRCNQP CGKNRQCGLH  600
ACARPCHPSP CDPPPTNGEA SSSSGGKVSC GQLCGVPRRE CKHTCNAPCH PSSPCPDVRC  660
EHRATITCSC GRISTTVPCS AGGAYNGDST FDISVIQQLP MPLQPVESNG KRVPLGQRKL  720
CCDEECAKVE RKRVLAEAFD ITQPNLDALH FGENSNASDL VSDLFRREPK WVLAIEERCK  780
FLVLGKTRGN SSSNMKFHVF CHMMKDKRDA IRLIADRWKL SVQAVGWEPK RFVTVHVTPK  840
SKVPARVLGS KPGVPVSAAH PYFDPMVDMD PRLVVAMLDL PRDADVNSLV LRFGGECELV  900
WLNDKNAAAV FSDPARAATA LRRLDYGSAY QGAAMFCPSS ITQASLSSNV WVGAPRDGGL  960
AAVSSASPWK KDSPSELKPN PHAVMTVLGR APGTSVLGHS PGSVWKPAVQ VTSSNRWNAL  1020
ESDAATSSGS TDKPKPRLRT DTGSSTSAPG VGAEPSAGQS VSKLQPDIEV EDWEEIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072430.4