PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 816aa MW: 93030.4 Da PI: 5.8383

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.9	1.9e-19	64	150	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY +Y+ + GF ++++++++ +g +++tf Csk g+++ ++ ++ ++ t+tgCkak+ vk + +++wev+ leleHnH+l TRIDC7AG072620.1 64 QFYVAYGCHSGFGITRRSNNTF--DGFRYRSTFICSKGGQSRLRSGV--TRPARKRGTKTGCKAKIIVKDAHfQNRWEVIVLELEHNHPLD 150 6**************99988..9999**********99877..77788889***********9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 816 aa Download sequence
RIDYLGPMEE EGYSTESSNE GDVQEDGDKE KSLAEGDVFK PVDMDPEWIP KVGMVFDSEE 60 DAFQFYVAYG CHSGFGITRR SNNTFDGFRY RSTFICSKGG QSRLRSGVTR PARKRGTKTG 120 CKAKIIVKDA HFQNRWEVIV LELEHNHPLD PGSVKYKKHL ENIPFSLNPP RLSEAPQSSS 180 VVGHSSSFGD SGIPSSAQIE IKTKIDRNRK LKLAEGDLEA LVSFFNDMQD RNPCFFHSLD 240 MNEQGQLRNV FWADAKSRSS YNYFGDVVAI NVTNFSDQYD IQFVSFVGTN HHAQPLLLGC 300 GLLAGRSLGA YVWLFDTWLR CMNATSPPSI ITNYCHDVAI AVKKVFPNSR HRFCLRHILN 360 ELPEKLAGME KKDEVISTFS TLAYDSVTTL DFDKEWQEMT HQFQLEGNEW LSKLYEVRAQ 420 WAPAYVKDFF WAGMSVTDRT DSATDYFDGW LTSDTSVKMF VEQYEAAVRT KLEKETYEDL 480 HSSQMRPQLM TGLPVEEQAA KMYTMEIFQT FLNELGRSFH CNYSILDRSD SVVTYIVSEH 540 VNQTKVDYKV AYDNAEDDIW CFCRLFQFKG ILCRHALTVL RQELVPMIPS KYIIHRWCKD 600 CKLTCSSMSR DVSLSSQELG GYDDLYKLGH QYFAEVVELG SVNSESKDYA LSVMREIRDK 660 VISYEKSLRD QRVDSQVSTA NFAYNPVNED FTDDALPISL STKGWDLMQG QSKRSRKKKL 720 TTPTVLDTLK KKTKRAYNKR RNATANNLCT TVTATDSITE SANVQEDQVN EGWPLTSSGA 780 PDTFPYGVET ISFDLTQYNN APSFHWPESS SRSQLQ

Sequence ? help Back to Top

Protein Sequence Length: 816 aa Download sequence

RIDYLGPMEE EGYSTESSNE GDVQEDGDKE KSLAEGDVFK PVDMDPEWIP KVGMVFDSEE  60
DAFQFYVAYG CHSGFGITRR SNNTFDGFRY RSTFICSKGG QSRLRSGVTR PARKRGTKTG  120
CKAKIIVKDA HFQNRWEVIV LELEHNHPLD PGSVKYKKHL ENIPFSLNPP RLSEAPQSSS  180
VVGHSSSFGD SGIPSSAQIE IKTKIDRNRK LKLAEGDLEA LVSFFNDMQD RNPCFFHSLD  240
MNEQGQLRNV FWADAKSRSS YNYFGDVVAI NVTNFSDQYD IQFVSFVGTN HHAQPLLLGC  300
GLLAGRSLGA YVWLFDTWLR CMNATSPPSI ITNYCHDVAI AVKKVFPNSR HRFCLRHILN  360
ELPEKLAGME KKDEVISTFS TLAYDSVTTL DFDKEWQEMT HQFQLEGNEW LSKLYEVRAQ  420
WAPAYVKDFF WAGMSVTDRT DSATDYFDGW LTSDTSVKMF VEQYEAAVRT KLEKETYEDL  480
HSSQMRPQLM TGLPVEEQAA KMYTMEIFQT FLNELGRSFH CNYSILDRSD SVVTYIVSEH  540
VNQTKVDYKV AYDNAEDDIW CFCRLFQFKG ILCRHALTVL RQELVPMIPS KYIIHRWCKD  600
CKLTCSSMSR DVSLSSQELG GYDDLYKLGH QYFAEVVELG SVNSESKDYA LSVMREIRDK  660
VISYEKSLRD QRVDSQVSTA NFAYNPVNED FTDDALPISL STKGWDLMQG QSKRSRKKKL  720
TTPTVLDTLK KKTKRAYNKR RNATANNLCT TVTATDSITE SANVQEDQVN EGWPLTSSGA  780
PDTFPYGVET ISFDLTQYNN APSFHWPESS SRSQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-109	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072620.1