PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1059aa MW: 115096 Da PI: 8.3433

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.8	4.2e-07	411	428	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.1 411 CGVHRCKVTCHEGECPPC 428 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG RAPRRRQRRP NRNNGPTPPP QERAPPSGPA 60 NAPAPRRQER APSSGPVNAS ALRRQERVSA PAPAATGGGT VPQLVQEIQD KLARGAVECM 120 ICYDMVRRSA PVWSCGSCFS IFHLPCIRKW ARSPASVSDA SAPASDAWRC PGCQSVQDVR 180 ARDIAYTCFC RRRRDPPNDL FLTPHSCGEP CSKPLGKADP AAKGDDDDDV ATRCPHVCVL 240 QCHPGPCPPC KAFAPERPCP CGKQSITRRC ADRSTPVTCG QRCEKLLPCR RHRCEKVCHT 300 GPCGDCEVNF PAQCFCGKKT ETLLCGEMVL KGKLSNKDGV FSCSEVCGHN LACRNHACQD 360 VCHPGPCGEC ELLPGKVTTC HCGKTRLQEK RASCLDPIPT CDKVCDKRLP CGVHRCKVTC 420 HEGECPPCLV RVEQRCRCGS SGQMVECYKV SMEEFRCNKP CGRKKNCGRH RCSECCCPLS 480 KPFAQHQGDS MDPHFCQIPC GKKLRCGQHG CQHLCHSGHC DPCRETIFHD LTCACGRTSI 540 PPPQPCGTPT PSCPHQCMVP QPCGHPASHQ CHFGDCPPCV VPVTRECVGG HVMLRNIPCG 600 SKDIRCNQPC GKNRQCGLHA CARTCHPAPC DPPPANGEAS SSSGGRVSCG QLCGVPRREC 660 KHTCNAPCHP SSPCPDVRCE HRVTITCSCG RITTAVPCSA GGAYNGDSAF DISVMQQLPM 720 PLQPVESNGK RVPLGQRKLC CDEECAKMER KRVLAEAFDI TPPNLDALHF GENSNASDLL 780 SDLFRREPKW VLAIEERCKF LVLGKTKGNS SSNIKFHVFC HMMKDKRDAI RLIADRWKLS 840 VQAVGWEPKR FITVHVTPKS KVPARVLGSK PGVPVSASHP YFDPMVDMDP RLVVAMLDLP 900 RDADVSSLVL RFGGECELVW LNDKNAAAVF SDPARAATAL RRLDYGSAYQ GAAMFCPSSI 960 TQASVPSNVW IGAQRDGGLA AKSSANPWKA SQSEPDPSGD WTVLSHASGS VWKRGDTPAQ 1020 VMGSSNRWNA LESDAATSSG PTNKRKPPLR TETGSSSSA

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence

XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG RAPRRRQRRP NRNNGPTPPP QERAPPSGPA  60
NAPAPRRQER APSSGPVNAS ALRRQERVSA PAPAATGGGT VPQLVQEIQD KLARGAVECM  120
ICYDMVRRSA PVWSCGSCFS IFHLPCIRKW ARSPASVSDA SAPASDAWRC PGCQSVQDVR  180
ARDIAYTCFC RRRRDPPNDL FLTPHSCGEP CSKPLGKADP AAKGDDDDDV ATRCPHVCVL  240
QCHPGPCPPC KAFAPERPCP CGKQSITRRC ADRSTPVTCG QRCEKLLPCR RHRCEKVCHT  300
GPCGDCEVNF PAQCFCGKKT ETLLCGEMVL KGKLSNKDGV FSCSEVCGHN LACRNHACQD  360
VCHPGPCGEC ELLPGKVTTC HCGKTRLQEK RASCLDPIPT CDKVCDKRLP CGVHRCKVTC  420
HEGECPPCLV RVEQRCRCGS SGQMVECYKV SMEEFRCNKP CGRKKNCGRH RCSECCCPLS  480
KPFAQHQGDS MDPHFCQIPC GKKLRCGQHG CQHLCHSGHC DPCRETIFHD LTCACGRTSI  540
PPPQPCGTPT PSCPHQCMVP QPCGHPASHQ CHFGDCPPCV VPVTRECVGG HVMLRNIPCG  600
SKDIRCNQPC GKNRQCGLHA CARTCHPAPC DPPPANGEAS SSSGGRVSCG QLCGVPRREC  660
KHTCNAPCHP SSPCPDVRCE HRVTITCSCG RITTAVPCSA GGAYNGDSAF DISVMQQLPM  720
PLQPVESNGK RVPLGQRKLC CDEECAKMER KRVLAEAFDI TPPNLDALHF GENSNASDLL  780
SDLFRREPKW VLAIEERCKF LVLGKTKGNS SSNIKFHVFC HMMKDKRDAI RLIADRWKLS  840
VQAVGWEPKR FITVHVTPKS KVPARVLGSK PGVPVSASHP YFDPMVDMDP RLVVAMLDLP  900
RDADVSSLVL RFGGECELVW LNDKNAAAVF SDPARAATAL RRLDYGSAYQ GAAMFCPSSI  960
TQASVPSNVW IGAQRDGGLA AKSSANPWKA SQSEPDPSGD WTVLSHASGS VWKRGDTPAQ  1020
VMGSSNRWNA LESDAATSSG PTNKRKPPLR TETGSSSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.1