PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1070aa MW: 115958 Da PI: 8.171

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.7	4.2e-07	388	405	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.2 388 CGVHRCKVTCHEGECPPC 405 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1070 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXGR APRRRQRRPN RNNGPTPPPQ ERAPPSGPAN 60 APAPVSAPAP AATGGGTVPQ LVQEIQDKLA RGAVECMICY DMVRRSAPVW SCGSCFSIFH 120 LPCIRKWARS PASVSDASAP ASDAWRCPGC QSVQDVRARD IAYTCFCRRR RDPPNDLFLT 180 PHSCGEPCSK PLGKADPAAK GDDDDDVATR CPHVCVLQCH PGPCPPCKAF APERPCPCGK 240 QSITRRCADR STPVTCGQRC EKLLPCRRHR CEKVCHTGPC GDCEVNFPAQ CFCGKKTETL 300 LCGEMVLKGK LSNKDGVFSC SEVCGHNLAC RNHACQDVCH PGPCGECELL PGKVTTCHCG 360 KTRLQEKRAS CLDPIPTCDK VCDKRLPCGV HRCKVTCHEG ECPPCLVRVE QRCRCGSSGQ 420 MVECYKVSME EFRCNKPCGR KKNCGRHRCS ECCCPLSKPF AQHQGDSMDP HFCQIPCGKK 480 LRCGQHGCQH LCHSGHCDPC RETIFHDLTC ACGRTSIPPP QPCGTPTPSC PHQCMVPQPC 540 GHPASHQCHF GDCPPCVVPV TRECVGGHVM LRNIPCGSKD IRCNQPCGKN RQCGLHACAR 600 TCHPAPCDPP PANGEASSSS GGRVSCGQLC GVPRRECKHT CNAPCHPSSP CPDVRCEHRV 660 TITCSCGRIT TAVPCSAGGA YNGDSAFDIS VMQQLPMPLQ PVESNGKRVP LGQRKLCCDE 720 ECAKMERKRV LAEAFDITPP NLDALHFGEN SNASDLLSDL FRREPKWVLA IEERCKFLVL 780 GKTKGNSSSN IKFHVFCHMM KDKRDAIRLI ADRWKLSVQA VGWEPKRFIT VHVTPKSKVP 840 ARVLGSKPGV PVSASHPYFD PMVDMDPRLV VAMLDLPRDA DVSSLVLRFG GECELVWLND 900 KNAAAVFSDP ARAATALRRL DYGSAYQGAA MFCPSSITQA SVPSNVWIGA QRDGGLAAKS 960 SANPWKASQS EPDPSGDWTV LSHASGSVWK RGDTPAQVMG SSNRWNALES DAATSSGPTN 1020 KRKPPLRTET GSSSSAPRVG AGSSAAPSAG QSVSKLQPDV EVEDWEESCE

Sequence ? help Back to Top

Protein Sequence Length: 1070 aa Download sequence

XXXXXXXXXX XXXXXXXXXX XXXXXXXXGR APRRRQRRPN RNNGPTPPPQ ERAPPSGPAN  60
APAPVSAPAP AATGGGTVPQ LVQEIQDKLA RGAVECMICY DMVRRSAPVW SCGSCFSIFH  120
LPCIRKWARS PASVSDASAP ASDAWRCPGC QSVQDVRARD IAYTCFCRRR RDPPNDLFLT  180
PHSCGEPCSK PLGKADPAAK GDDDDDVATR CPHVCVLQCH PGPCPPCKAF APERPCPCGK  240
QSITRRCADR STPVTCGQRC EKLLPCRRHR CEKVCHTGPC GDCEVNFPAQ CFCGKKTETL  300
LCGEMVLKGK LSNKDGVFSC SEVCGHNLAC RNHACQDVCH PGPCGECELL PGKVTTCHCG  360
KTRLQEKRAS CLDPIPTCDK VCDKRLPCGV HRCKVTCHEG ECPPCLVRVE QRCRCGSSGQ  420
MVECYKVSME EFRCNKPCGR KKNCGRHRCS ECCCPLSKPF AQHQGDSMDP HFCQIPCGKK  480
LRCGQHGCQH LCHSGHCDPC RETIFHDLTC ACGRTSIPPP QPCGTPTPSC PHQCMVPQPC  540
GHPASHQCHF GDCPPCVVPV TRECVGGHVM LRNIPCGSKD IRCNQPCGKN RQCGLHACAR  600
TCHPAPCDPP PANGEASSSS GGRVSCGQLC GVPRRECKHT CNAPCHPSSP CPDVRCEHRV  660
TITCSCGRIT TAVPCSAGGA YNGDSAFDIS VMQQLPMPLQ PVESNGKRVP LGQRKLCCDE  720
ECAKMERKRV LAEAFDITPP NLDALHFGEN SNASDLLSDL FRREPKWVLA IEERCKFLVL  780
GKTKGNSSSN IKFHVFCHMM KDKRDAIRLI ADRWKLSVQA VGWEPKRFIT VHVTPKSKVP  840
ARVLGSKPGV PVSASHPYFD PMVDMDPRLV VAMLDLPRDA DVSSLVLRFG GECELVWLND  900
KNAAAVFSDP ARAATALRRL DYGSAYQGAA MFCPSSITQA SVPSNVWIGA QRDGGLAAKS  960
SANPWKASQS EPDPSGDWTV LSHASGSVWK RGDTPAQVMG SSNRWNALES DAATSSGPTN  1020
KRKPPLRTET GSSSSAPRVG AGSSAAPSAG QSVSKLQPDV EVEDWEESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.2