PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 909aa MW: 98449.8 Da PI: 8.0212

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	22	3.5e-07	227	244	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.4 227 CGVHRCKVTCHEGECPPC 244 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 909 aa Download sequence
AYTCFCRRRR DPPNDLFLTP HSCGEPCSKP LGKADPAAKG DDDDDVATRC PHVCVLQCHP 60 GPCPPCKAFA PERPCPCGKQ SITRRCADRS TPVTCGQRCE KLLPCRRHRC EKVCHTGPCG 120 DCEVNFPAQC FCGKKTETLL CGEMVLKGKL SNKDGVFSCS EVCGHNLACR NHACQDVCHP 180 GPCGECELLP GKVTTCHCGK TRLQEKRASC LDPIPTCDKV CDKRLPCGVH RCKVTCHEGE 240 CPPCLVRVEQ RCRCGSSGQM VECYKVSMEE FRCNKPCGRK KNCGRHRCSE CCCPLSKPFA 300 QHQGDSMDPH FCQIPCGKKL RCGQHGCQHL CHSGHCDPCR ETIFHDLTCA CGRTSIPPPQ 360 PCGTPTPSCP HQCMVPQPCG HPASHQCHFG DCPPCVVPVT RECVGGHVML RNIPCGSKDI 420 RCNQPCGKNR QCGLHACART CHPAPCDPPP ANGEASSSSG GRVSCGQLCG VPRRECKHTC 480 NAPCHPSSPC PDVRCEHRVT ITCSCGRITT AVPCSAGGAY NGDSAFDISV MQQLPMPLQP 540 VESNGKRVPL GQRKLCCDEE CAKMERKRVL AEAFDITPPN LDALHFGENS NASDLLSDLF 600 RREPKWVLAI EERCKFLVLG KTKGNSSSNI KFHVFCHMMK DKRDAIRLIA DRWKLSVQAV 660 GWEPKRFITV HVTPKSKVPA RVLGSKPGVP VSASHPYFDP MVDMDPRLVV AMLDLPRDAD 720 VSSLVLRFGG ECELVWLNDK NAAAVFSDPA RAATALRRLD YGSAYQGAAM FCPSSITQAS 780 VPSNVWIGAQ RDGGLAAKSS ANPWKASQSE PDPSGDWTVL SHASGSVWKR GDTPAQVMGS 840 SNRWNALESD AATSSGPTNK RKPPLRTETG SSSSAPRVGA GSSAAPSAGQ SVSKLQPDVE 900 VEDWEESCE

Sequence ? help Back to Top

Protein Sequence Length: 909 aa Download sequence

AYTCFCRRRR DPPNDLFLTP HSCGEPCSKP LGKADPAAKG DDDDDVATRC PHVCVLQCHP  60
GPCPPCKAFA PERPCPCGKQ SITRRCADRS TPVTCGQRCE KLLPCRRHRC EKVCHTGPCG  120
DCEVNFPAQC FCGKKTETLL CGEMVLKGKL SNKDGVFSCS EVCGHNLACR NHACQDVCHP  180
GPCGECELLP GKVTTCHCGK TRLQEKRASC LDPIPTCDKV CDKRLPCGVH RCKVTCHEGE  240
CPPCLVRVEQ RCRCGSSGQM VECYKVSMEE FRCNKPCGRK KNCGRHRCSE CCCPLSKPFA  300
QHQGDSMDPH FCQIPCGKKL RCGQHGCQHL CHSGHCDPCR ETIFHDLTCA CGRTSIPPPQ  360
PCGTPTPSCP HQCMVPQPCG HPASHQCHFG DCPPCVVPVT RECVGGHVML RNIPCGSKDI  420
RCNQPCGKNR QCGLHACART CHPAPCDPPP ANGEASSSSG GRVSCGQLCG VPRRECKHTC  480
NAPCHPSSPC PDVRCEHRVT ITCSCGRITT AVPCSAGGAY NGDSAFDISV MQQLPMPLQP  540
VESNGKRVPL GQRKLCCDEE CAKMERKRVL AEAFDITPPN LDALHFGENS NASDLLSDLF  600
RREPKWVLAI EERCKFLVLG KTKGNSSSNI KFHVFCHMMK DKRDAIRLIA DRWKLSVQAV  660
GWEPKRFITV HVTPKSKVPA RVLGSKPGVP VSASHPYFDP MVDMDPRLVV AMLDLPRDAD  720
VSSLVLRFGG ECELVWLNDK NAAAVFSDPA RAATALRRLD YGSAYQGAAM FCPSSITQAS  780
VPSNVWIGAQ RDGGLAAKSS ANPWKASQSE PDPSGDWTVL SHASGSVWKR GDTPAQVMGS  840
SNRWNALESD AATSSGPTNK RKPPLRTETG SSSSAPRVGA GSSAAPSAGQ SVSKLQPDVE  900
VEDWEESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.4