PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 784aa MW: 84744 Da PI: 8.0096

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	22.2	3e-07	102	119	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.8 102 CGVHRCKVTCHEGECPPC 119 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence
FPAQCFCGKK TETLLCGEMV LKGKLSNKDG VFSCSEVCGH NLACRNHACQ DVCHPGPCGE 60 CELLPGKVTT CHCGKTRLQE KRASCLDPIP TCDKVCDKRL PCGVHRCKVT CHEGECPPCL 120 VRVEQRCRCG SSGQMVECYK VSMEEFRCNK PCGRKKNCGR HRCSECCCPL SKPFAQHQGD 180 SMDPHFCQIP CGKKLRCGQH GCQHLCHSGH CDPCRETIFH DLTCACGRTS IPPPQPCGTP 240 TPSCPHQCMV PQPCGHPASH QCHFGDCPPC VVPVTRECVG GHVMLRNIPC GSKDIRCNQP 300 CGKNRQCGLH ACARTCHPAP CDPPPANGEA SSSSGGRVSC GQLCGVPRRE CKHTCNAPCH 360 PSSPCPDVRC EHRVTITCSC GRITTAVPCS AGGAYNGDSA FDISVMQQLP MPLQPVESNG 420 KRVPLGQRKL CCDEECAKME RKRVLAEAFD ITPPNLDALH FGENSNASDL LSDLFRREPK 480 WVLAIEERCK FLVLGKTKGN SSSNIKFHVF CHMMKDKRDA IRLIADRWKL SVQAVGWEPK 540 RFITVHVTPK SKVPARVLGS KPGVPVSASH PYFDPMVDMD PRLVVAMLDL PRDADVSSLV 600 LRFGGECELV WLNDKNAAAV FSDPARAATA LRRLDYGSAY QGAAMFCPSS ITQASVPSNV 660 WIGAQRDGGL AAKSSANPWK ASQSEPDPSG DWTVLSHASG SVWKRGDTPA QVMGSSNRWN 720 ALESDAATSS GPTNKRKPPL RTETGSSSSA PRVGAGSSAA PSAGQSVSKL QPDVEVEDWE 780 ESCE

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence

FPAQCFCGKK TETLLCGEMV LKGKLSNKDG VFSCSEVCGH NLACRNHACQ DVCHPGPCGE  60
CELLPGKVTT CHCGKTRLQE KRASCLDPIP TCDKVCDKRL PCGVHRCKVT CHEGECPPCL  120
VRVEQRCRCG SSGQMVECYK VSMEEFRCNK PCGRKKNCGR HRCSECCCPL SKPFAQHQGD  180
SMDPHFCQIP CGKKLRCGQH GCQHLCHSGH CDPCRETIFH DLTCACGRTS IPPPQPCGTP  240
TPSCPHQCMV PQPCGHPASH QCHFGDCPPC VVPVTRECVG GHVMLRNIPC GSKDIRCNQP  300
CGKNRQCGLH ACARTCHPAP CDPPPANGEA SSSSGGRVSC GQLCGVPRRE CKHTCNAPCH  360
PSSPCPDVRC EHRVTITCSC GRITTAVPCS AGGAYNGDSA FDISVMQQLP MPLQPVESNG  420
KRVPLGQRKL CCDEECAKME RKRVLAEAFD ITPPNLDALH FGENSNASDL LSDLFRREPK  480
WVLAIEERCK FLVLGKTKGN SSSNIKFHVF CHMMKDKRDA IRLIADRWKL SVQAVGWEPK  540
RFITVHVTPK SKVPARVLGS KPGVPVSASH PYFDPMVDMD PRLVVAMLDL PRDADVSSLV  600
LRFGGECELV WLNDKNAAAV FSDPARAATA LRRLDYGSAY QGAAMFCPSS ITQASVPSNV  660
WIGAQRDGGL AAKSSANPWK ASQSEPDPSG DWTVLSHASG SVWKRGDTPA QVMGSSNRWN  720
ALESDAATSS GPTNKRKPPL RTETGSSSSA PRVGAGSSAA PSAGQSVSKL QPDVEVEDWE  780
ESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.8