PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG075770.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 188aa    MW: 21220.6 Da    PI: 8.6508
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG075770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.7e-121759754
                      HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  TRIDC7AG075770.1 17 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 59
                      79*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
PASRKKRVEG MPSKNLMAER RRRKRLNDRL SMLRSVVPKI SKMDRTSILG DTIDYMKELL  60
ERIRRLQEEM EEPHAGPAAA PLLSVFRELN PNEMLARNTP KFEVERKEED TRVEIYCAAK  120
PGLLLSTVST LDTLGLDIQQ CVVSCFNDFA MHASCSEVPT IPQPTSKHGW ILLLSSAPPS  180
VQPPIPTD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1425RKKRVEGMPSKNLMAERRRRKR
2526RKKRVEGMPSKNLMAERRRRKR
31926ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-46bHLH family protein