PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG077460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 335aa    MW: 37317.3 Da    PI: 6.08
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG077460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.78.3e-153581349
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      i+n+  r  tf kRr g++K A  +S L++a+vav++  ++gk++ +
  TRIDC7AG077460.1 35 IQNDKDRDLTFYKRRSGLFKRATDISSLTGARVAVVLETNNGKMHSF 81
                      99*******************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
VFYRSLCFLF VVVTFFLFVH ISMPRKERRS GVAYIQNDKD RDLTFYKRRS GLFKRATDIS  60
SLTGARVAVV LETNNGKMHS FGTPLADPIV DAFLFGARTA VPSVDEATTA RIGSVQNEVA  120
QLDMENMSEE DKNQLSILRM KNIQEENPCM VANLIFTKEQ DLGLEDLNKL FSELSRVQKD  180
IRFRLPPLHG REDKTGGTCV AQDLQLPSVL PADHLGTTHS LMQSSWPHNL SQLQLPLDPL  240
PPQPEQTPAP LFPMQAPQMF HSAPTSLAPH LDSHVQPIPN QVHEQTPPEE LHVQNYESPC  300
NIVQPQKNDA NHDSTSGKNL EASALLGYSS GNALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-11M-type_MADS family protein