PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG001390.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 241aa    MW: 27379.5 Da    PI: 5.758
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG001390.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.7e-13125171147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +g WT++E+ l++++    G g Wk I++++ + Rt+ q+ s+ qky
  TRIDC7BG001390.2 125 KGFWTPDEHRLFLHGLSVCGRGKWKDISKHFVTSRTPTQISSHAQKY 171
                       688*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MNPRVNQEWT PSEVEGDRSI IDGLNNNYYN DGTSHEMHML QCPEKECHVT NSDHGVNYTV  60
DGPVSKYFGL QEEAAMEGTD FLFGCPLDIR KTIDSQEEVP MVEQNKVVLE NKTFIHQPVL  120
APHAKGFWTP DEHRLFLHGL SVCGRGKWKD ISKHFVTSRT PTQISSHAQK YFMRLKSKGS  180
GSQRYSINDV ELDDANPWKM ENSFNFWQAL ALQSTIGADN QNPSFNLQTP SSPFVTMNNI  240
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10580.24e-21MYB_related family protein