PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 253aa    MW: 28908.7 Da    PI: 9.6179
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.19.7e-192369148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT eEd +lv++v+q+G + W+ Ia++++ gR +kqc++rw+++l
  TRIDC7BG003140.1 23 KGQWTLEEDRKLVKLVEQFGLRKWSQIAQMLP-GRVGKQCRERWHNHL 69
                      799*****************************.*************97 PP
2Myb_DNA-binding51.13.1e-1675117145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       ++ W++eEd  l++ +k+ G++ W+ Ia++++ gRt++++k++w+
  TRIDC7BG003140.1  75 KDTWSEEEDMVLIQTHKEVGNK-WAEIAKRLP-GRTENSIKNHWN 117
                       679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MSRRFFPRKK ASSKALKRAN VVKGQWTLEE DRKLVKLVEQ FGLRKWSQIA QMLPGRVGKQ  60
CRERWHNHLR PNIKKDTWSE EEDMVLIQTH KEVGNKWAEI AKRLPGRTEN SIKNHWNATK  120
RRQFARRRTR TSAKNIKSGT LLQNYIKSLG IGSSKVTAAP LAPKEPPLSP SSPAPPTQNL  180
AQVNDSWSES NPSNTMITQG LFSTDDREAD SCEEVLVPTC DDFSVDMCDG LFDTKEDAQY  240
PVYSIDDDVD MDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.12e-60MYB family protein