PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003150.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 25023.2 Da    PI: 7.8732
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.61.7e-28149351
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      i+nks rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7BG003150.1  1 IDNKSSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 49
                      89*********************************************96 PP
2K-box92.76.2e-317416212100
             K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       +++ + +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++  l+q+ el++ke++lq+ nk+Lrkk++e
  TRIDC7BG003150.1  74 ETELNNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 162
                       44557899*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
IDNKSSRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGRLFEFSTS SCMYKTLERY  60
RSCNFNSEAT AAPETELNNY QEYLKLKTRV EFLQTTQRNL LGEDLGPLNM KELEQLENQI  120
EISLKHIRAT KSQQSLDQLF ELKRKEQQLQ DVNKDLRKKI QETSAENVLQ LSCQDVGPSG  180
SSGHANQANQ QQHFHPACDP SMRIGYQRNF LDQLNNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.12e-67MIKC_MADS family protein