PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003190.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 81aa    MW: 9238.76 Da    PI: 9.9889
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003190.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.93.7e-30252151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
             SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                       kri+nk  rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7BG003190.16  2 KRIDNKVSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 52
                       79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
LKRIDNKVSR QVTFAKRRNG LLKKAYELSV LCDAEVALII FSTRGRLFEF STSSWYPTTA  60
DSAPICLFYP KEFAPRSSPC M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.12e-29MIKC_MADS family protein