PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 315aa    MW: 36283 Da    PI: 9.6126
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.42.2e-2997147151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       kri+nks rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7BG003240.1  97 KRIDNKSSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 147
                       79***********************************************96 PP
2K-box93.82.9e-311672589100
             K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       ++++ +++ +qe+ kLk +++ Lq++qR+llGedL++L++keL+qLe+++e slk+iR++K++  ++q+ el++ke++lq+ nk+Lrkk++e
  TRIDC7BG003240.1 167 ATSTPESEDYQEYLKLKTRVDFLQTTQRNLLGEDLGPLNMKELEQLENHIEMSLKHIRATKSQQSFDQLFELKRKEQQLQDVNKDLRKKIQE 258
                       4555667889********************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
AAGGRPKREE IFLFPVEGGD LQSRYRGKGK IGSTVRACGS IHPWHKEREA LFTTTTTLRP  60
PLSGQHRREK EKRIGEREGQ GSRIKARGMG RGKVELKRID NKSSRQVTFA KRRNGLLKKA  120
YELSVLCDAE VALIIFSTRG RLFEFSTSSC MYKTLERYRS CNFNSEATST PESEDYQEYL  180
KLKTRVDFLQ TTQRNLLGED LGPLNMKELE QLENHIEMSL KHIRATKSQQ SFDQLFELKR  240
KEQQLQDVNK DLRKKIQETS AESVLQMFCQ DVDVGPSGSS GHANQANQQQ HFHPDCDPSL  300
RMWYDHAYLD HLNKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.18e-71MIKC_MADS family protein