PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004100.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 251aa MW: 27659.4 Da PI: 9.1757

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004100.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.4e-09	1	36	6	43
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaei 43 n E+rRR+riN+++ L++l+P+ + + + +K ++ TRIDC7BG004100.3 1 NLSEKRRRSRINEKMKALQSLIPNsN---KVGSATKLTT 36 678*********************66...5555555554 PP
2	HLH	14.2	8.3e-05	62	78	39	55
TCHHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksLq 55 +Ka++L +A+eY+k+Lq TRIDC7BG004100.3 62 DKASMLDEAIEYLKQLQ 78 8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
NLSEKRRRSR INEKMKALQS LIPNSNKVGS ATKLTTVPLH FSFSSLNSGL LSFVVLLWLQ 60 TDKASMLDEA IEYLKQLQLQ VQMLSMRNGV YLNPSYLSGA LEPMQASQMF AALGVSGRNV 120 AAPSSGAVAP PVNQSSGAHH PFDPMNSQQN QPQPLVLPSC PKTTISEPPF HLESSQSHLQ 180 SFQLPESSEL MLRGDIMLKH HLTSAQDRAD PSGNKMNSLR QESTMLNTHF DGCSRSKEQS 240 HDMVPANTRH V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	4e-28	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004100.3