PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004490.17

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 434aa MW: 49834.5 Da PI: 8.715

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.17	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.6	2.8e-20	51	137	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.17 51 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTVGTGCKAKINITRAPDGRFHLSTVILDHNHALSP 137 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
DMSISSDDDG IKQQRESNVE LAHDRAEAHP DGLLREPEVG MSFGTETEVR EYYNTYAKAK 60 GFGVTRRSSN RDDNGQLKYL TFSCSRYGKA QSNSGNMLKP SRTVGTGCKA KINITRAPDG 120 RFHLSTVILD HNHALSPLKP RRFRCNKKLD FRVKRRLELN DPAEIRVNKS STIPRVTHFD 180 IEKQFQSAYT NSKFKEFQEE LTQTMYCDRK LMQKEGAIET YEITEDVLID EDKGWRKDIV 240 HHVYFSEEEF EVKCSCRRFE FTGILCRHVL CVLTHKKIKE VPPQYVLDRS KKNVNRKHNF 300 IRCTYGGMED TPAAERFDRL CNSFYPVAEI GSMSDDSCNA LIEELRTLKI RFSSNSSSEN 360 GKEHVATRED AHSNGKTTSK NIPSPIAVRC AGCPPSLRKE SMLDKLICQA SEKKKEAEQK 420 VLLHILRLFV SYFL

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

DMSISSDDDG IKQQRESNVE LAHDRAEAHP DGLLREPEVG MSFGTETEVR EYYNTYAKAK  60
GFGVTRRSSN RDDNGQLKYL TFSCSRYGKA QSNSGNMLKP SRTVGTGCKA KINITRAPDG  120
RFHLSTVILD HNHALSPLKP RRFRCNKKLD FRVKRRLELN DPAEIRVNKS STIPRVTHFD  180
IEKQFQSAYT NSKFKEFQEE LTQTMYCDRK LMQKEGAIET YEITEDVLID EDKGWRKDIV  240
HHVYFSEEEF EVKCSCRRFE FTGILCRHVL CVLTHKKIKE VPPQYVLDRS KKNVNRKHNF  300
IRCTYGGMED TPAAERFDRL CNSFYPVAEI GSMSDDSCNA LIEELRTLKI RFSSNSSSEN  360
GKEHVATRED AHSNGKTTSK NIPSPIAVRC AGCPPSLRKE SMLDKLICQA SEKKKEAEQK  420
VLLHILRLFV SYFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	157	RRFRCNKKLDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	7e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.17