PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004670.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 422aa MW: 45874.1 Da PI: 5.8766

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004670.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.7e-17	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed llv+ v+q+G g+W+++ r g+ R++k+c++rw ++l TRIDC7BG004670.2 40 KGPWTTAEDALLVNHVRQHGEGNWNAVQRITGLLRCGKSCRLRWTNHL 87 79****************************99*********996 PP
2	Myb_DNA-binding	49.9	7.3e-16	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++++E++l +++++qlG++ W++ a +++ gRt++++k++w++ TRIDC7BG004670.2 93 KGAFSPDEELLVAQLHAQLGNK-WARMATHLP-GRTDNEIKNYWNT 136 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MATSLEEEQA AAAAAADNLD EEVEQREEGE EEATPVVLKK GPWTTAEDAL LVNHVRQHGE 60 GNWNAVQRIT GLLRCGKSCR LRWTNHLRPN LKKGAFSPDE ELLVAQLHAQ LGNKWARMAT 120 HLPGRTDNEI KNYWNTRAKR RQRAGLPMYP PEVQLQLAIT KRCRYTDFSP PQQSAGTNVL 180 DATDAGYTSA RPPPLDLAGQ LAMANRPVQF LSQTPFSAPS SPWVKPSFAR NARFFQFPHS 240 SPVSPTTPEL SLGHRLPGGD RTRFTPLSPS PGAKVELPSN QLRPASPATA TADNGGGLGE 300 DQQNLEAMLQ ELHDAIKIEP PKHVSGHAEQ NGASGGNKSE GELLKDDDDI GTLFDMIIPK 360 GFSMTEPAPP TVGPNHSGGS ISQHGSDDHN VNLSVDHLPV MSSEQDWVLD GACQWNNMSG 420 IC

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MATSLEEEQA AAAAAADNLD EEVEQREEGE EEATPVVLKK GPWTTAEDAL LVNHVRQHGE  60
GNWNAVQRIT GLLRCGKSCR LRWTNHLRPN LKKGAFSPDE ELLVAQLHAQ LGNKWARMAT  120
HLPGRTDNEI KNYWNTRAKR RQRAGLPMYP PEVQLQLAIT KRCRYTDFSP PQQSAGTNVL  180
DATDAGYTSA RPPPLDLAGQ LAMANRPVQF LSQTPFSAPS SPWVKPSFAR NARFFQFPHS  240
SPVSPTTPEL SLGHRLPGGD RTRFTPLSPS PGAKVELPSN QLRPASPATA TADNGGGLGE  300
DQQNLEAMLQ ELHDAIKIEP PKHVSGHAEQ NGASGGNKSE GELLKDDDDI GTLFDMIIPK  360
GFSMTEPAPP TVGPNHSGGS ISQHGSDDHN VNLSVDHLPV MSSEQDWVLD GACQWNNMSG  420
IC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	1e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004670.2