PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG006340.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 397aa    MW: 43499 Da    PI: 6.4052
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG006340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF36.28e-124086349
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      i ++  r  tfskRr g++K A  LS  + a+va+++  ++ k++ +
  TRIDC7BG006340.1 40 ITDDKERDFTFSKRRGGLFKIAADLSAITSARVAIVVEKENEKMHSF 86
                      789999***************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
FSKSQAFCRS LWFLFLVVSF FVLIGVTMSK KDRRSAITYI TDDKERDFTF SKRRGGLFKI  60
AADLSAITSA RVAIVVEKEN EKMHSFGTPS ADPIVDAFLA GAPLAIPLAD EATTTRIAQL  120
QSEVARLDMH CMKEFKENQL SIKHMKQIME QHPGTVANLI FSKEEQLSPE DLKHLSNEIY  180
RVHEEIGHRL PPLHYGHKTM TSRASMMQNM LPSSGPPSNH MKTVPSSVHS PWADHLPQHH  240
MVSSPLPPSP GQIVAPHFPQ VPSMFHPAPS SSVPQIASPL QTTSNQALEL PPPLDISVED  300
YVSSSNPVNP QQNNANPNST TRYNLAASPL LVNSGGNDLT VNDPFGYESW GYGLSDQPFY  360
NGFPEMGAYM GYNGADVGQS SVGNGGWVDA PPESSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22630.14e-13MIKC_MADS family protein