PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG007230.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 623aa    MW: 68339.2 Da    PI: 6.8679
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG007230.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.21.8e-28211264155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC7BG007230.2 211 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 264
                       79*******************.********************************8 PP
2Myb_DNA-binding38.92.1e-12213263148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I + m+ +++t++++ s++qky+
  TRIDC7BG007230.2 213 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 263
                       678********************************99*************7 PP
3Response_reg72.22.1e-24301381109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i  +++ge + +l+ + 
  TRIDC7BG007230.2  30 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKnmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVISKSTNGETKSVLKGIT 120
                       799********************.***************999999*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  TRIDC7BG007230.2 121 HGACDYLLKPVRIEELRN 138
                       ****************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    
MLLDDMMMEG RKGLMERERE RDQFPVGMRV LAVDDDPVCL KVLEVLLRRC QYHVTTTNQA  60
ATALRLLREN KNMFDLVISD VHMPDMDGFK LLELVGLEMD LPVISKSTNG ETKSVLKGIT  120
HGACDYLLKP VRIEELRNVW QHVVRRKFSN REPNNLDFCK EISRDSYHRL GQATCDRSSD  180
QSNRASKKRK ELHNEEEDEG EDNDNAAASK KPRVVWSVEL HRKFVAAVNQ LGIDKAVPKR  240
ILELMNVEKL TRENVASHLQ KYRLYLRRLS AVASQQASIA AAFGGRDPFM HMGAYGLHSY  300
HQPFAPSAAP PSFNPHGLVS GAGAAAFGLQ DLASPKGIHC AGNNGEVSHC AGDTNKFHIV  360
SLQDNQHADL TQGLTASSLG QPRLQQEWIH QETSDLCSVF SGGALANTMP GTFQRITGSS  420
LPPEDLLECT PHVKVGAHPS IGIQTASSGL LERSQQGALP IGDGFSVDKL PLHISFHGAV  480
ATKLDASFVA EEQGMDQKGI FSERMTVGAC PSESLIAASS GRCGASSSGS TMLLPPHDTD  540
RHSKYLQFGV ASNSRHRMDG TRQDQRLNNG DFSYDGAIVP EQTDVYDFGI SKLQGQGALN  600
NSSCNFDGLL NSIIKVVRTS IML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-103ARR-B family protein