PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG007230.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 499aa MW: 54265.7 Da PI: 7.108

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG007230.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.6	1.3e-28	83	136	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl TRIDC7BG007230.3 83 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 136 79*****************.******************************8 PP
2	Myb_DNA-binding	39.3	1.5e-12	85	135	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +++t++++ s++qky+ TRIDC7BG007230.3 85 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 135 678******************************99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
KPVRIEELRN VWQHVVRRKF SNREPNNLDF CKEISRDSYH RLGQATCDRS SDQSNRASKK 60 RKELHNEEED EGEDNDNAAA SKKPRVVWSV ELHRKFVAAV NQLGIDKAVP KRILELMNVE 120 KLTRENVASH LQKYRLYLRR LSAVASQQAS IAAAFGGRDP FMHMGAYGLH SYHQPFAPSA 180 APPSFNPHGL VSGAGAAAFG LQDLASPKGI HCAGNNGEVS HCAGDTNKFH IVSLQDNQHA 240 DLTQGLTASS LGQPRLQQEW IHQETSDLCS VFSGGALANT MPGTFQRITG SSLPPEDLLE 300 CTPHVKVGAH PSIGIQTASS GLLERSQQGA LPIGDGFSVD KLPLHISFHG AVATKLDASF 360 VAEEQGMDQK GIFSERMTVG ACPSESLIAA SSGRCGASSS GSTMLLPPHD TDRHSKYLQF 420 GVASNSRHRM DGTRQDQRLN NGDFSYDGAI VPEQTDVYDF GISKLQGQGA LNNSSCNFDG 480 LLNSIIKVEN PHVMTMLPL

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

KPVRIEELRN VWQHVVRRKF SNREPNNLDF CKEISRDSYH RLGQATCDRS SDQSNRASKK  60
RKELHNEEED EGEDNDNAAA SKKPRVVWSV ELHRKFVAAV NQLGIDKAVP KRILELMNVE  120
KLTRENVASH LQKYRLYLRR LSAVASQQAS IAAAFGGRDP FMHMGAYGLH SYHQPFAPSA  180
APPSFNPHGL VSGAGAAAFG LQDLASPKGI HCAGNNGEVS HCAGDTNKFH IVSLQDNQHA  240
DLTQGLTASS LGQPRLQQEW IHQETSDLCS VFSGGALANT MPGTFQRITG SSLPPEDLLE  300
CTPHVKVGAH PSIGIQTASS GLLERSQQGA LPIGDGFSVD KLPLHISFHG AVATKLDASF  360
VAEEQGMDQK GIFSERMTVG ACPSESLIAA SSGRCGASSS GSTMLLPPHD TDRHSKYLQF  420
GVASNSRHRM DGTRQDQRLN NGDFSYDGAI VPEQTDVYDF GISKLQGQGA LNNSSCNFDG  480
LLNSIIKVEN PHVMTMLPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	4e-38	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG007230.3