PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG007260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 657aa    MW: 71522 Da    PI: 6.1029
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG007260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.11.9e-28216269155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC7BG007260.1 216 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 269
                       79*******************.********************************8 PP
2Myb_DNA-binding38.82.2e-12218268148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I + m+ +++t++++ s++qky+
  TRIDC7BG007260.1 218 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 268
                       678********************************99*************7 PP
3Response_reg78.32.6e-26301381109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge + +l+ + 
  TRIDC7BG007260.1  30 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGIT 120
                       799********************.***************99999********************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  TRIDC7BG007260.1 121 HGACDYLLKPVRIEELRN 138
                       ****************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
MLLDAMTMEA RKGLMERERE RDQFPVGMRV LAVDDDPVCL KVLEVLLRRC QYHVTTTNQA  60
ATALRLLREN KDMFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSVNG ETKSVLKGIT  120
HGACDYLLKP VRIEELRNVW QHVVRRKFSN REPNNNHDLC KEISKPPSAD SYHRLGQATC  180
GMSSDQSNRA GKKRKEPHSE EEDEGEDNDD AAGSKKPRVV WSVELHRKFV AAVNQLGIDK  240
AVPKRILELM NVEKLTRENV ASHLQKYRLY LRRLSAVASQ QASIAAAFGG RDPFLHMGAF  300
EGLHSYHQPF APPAALPSLN PHGLLSGAGA AAFGLQDLAS PKANQCSSSN GAVSHCAGDT  360
EKFHIVSLQD NQQADLSQGL TSSLGQPQLH QKWIHQETSD LCSVFSGGAL ANTMSGTLQR  420
VTSSSLPPED LLECTAHIKV GAHPSIGIPT GSSGLLERSV GVSADLRDSC ISQQCALPIS  480
DGFSVDKLPL HIPFDGTGTT KLDASFVAGE QEMDQKGIFS ERMAVTVCPS ESLIVASNAK  540
CGASSCGSTM LLPPHDTEKH SKYLQFVVAS NSRHRMDGGM RQDQRLNSGG FSYDGGAIVP  600
EQTDMYDLGV PKLQGGFNSS SCNFDGLLNS MIKVESDEVP FTENDLGCEL FPLGACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-106ARR-B family protein