PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG010500.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 254aa    MW: 27063.5 Da    PI: 8.6989
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG010500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.9e-161661348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +WT  Ede+l+ +vk +G g+W+  +++ g++R++k+c++rw++yl
  TRIDC7BG010500.1 16 AWTSKEDEILASYVKAHGEGRWRELPQRAGLRRCGKSCRLRWLNYL 61
                      6*******************************************97 PP
2Myb_DNA-binding46.86.8e-1567111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ + +E+el+v+++ +lG++ W+ Ia +++ gRt++++k++w++ 
  TRIDC7BG010500.1  67 RGNISDDEEELIVRLHGLLGNR-WSIIAGRLP-GRTDNEIKNYWNST 111
                       7899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
SGTRCVPNRL VIAIFAWTSK EDEILASYVK AHGEGRWREL PQRAGLRRCG KSCRLRWLNY  60
LRPNIKRGNI SDDEEELIVR LHGLLGNRWS IIAGRLPGRT DNEIKNYWNS TLGRKALPAR  120
PAIAAARTIA TPVASGSSSS TAGNAAVALS TSVPAVLHAA APSSPTAAVW APKPVRCTGG  180
LFFRRETPPP APVVAETRAG GEEGDACSGS CSETSSAEPC SSGSGGGDWM DDVRALASFL  240
ESDEEWLKSL HMAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-52MYB family protein