PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG011540.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 638aa    MW: 71037.1 Da    PI: 5.0372
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG011540.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.64.7e-1102586331373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd + a++lL ++++++ p+gd++qRla++f+e+L+arla+++s++y++l +++ts   ++e l+a+klf  ++ + k 
  TRIDC7BG011540.3 258 LRTMLVHCAQAVAAGDSRGATELLRQIKQHSGPTGDATQRLAHCFAEGLEARLAGTGSQVYQSLVAKRTS---VVEFLKAYKLFMAACCFKKA 347
                       5789***************************************************************999...******************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        +  aN++Il+av+g++r+Hi+Df++++GlQWp L++ La+R++gpp++RiTg++ p++g   ++++eetg+rL++ A+elgvpf+f+  va 
  TRIDC7BG011540.3 348 NFGFANKTILNAVAGKRRLHIVDFGVQYGLQWPGLMRWLAQRDGGPPEVRITGIDLPQPGfrPARQVEETGRRLSSCARELGVPFKFHG-VAA 439
                       ***********************************************************9*9***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +l++++ e+Lr++p+E+l+V+++  l +l+d+sv+++      +rd vL+ +++++P+v+v    +  ++++ F++rf ea+ +ysa fd+l+
  TRIDC7BG011540.3 440 KLDTVRGEDLRIDPDEVLIVHCQCGLSNLMDDSVAVTTdggpsPRDVVLRNIRDMRPDVFVEGVANGGYGAPFFVTRFREAMFFYSAHFDMLD 532
                       **********************************9987778889************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a+lpr+++er  +Er ++gr + nv+acega+r+er et+++W++r ++aG++++pl+ +++  ++  +r+++ + + v+ ++++l++gWk+r
  TRIDC7BG011540.3 533 ATLPRDNDERLLIERDIIGRGALNVIACEGADRVERPETYRQWQARNRRAGLRQLPLDPEVVGMVREKVREHYHKDFLVDVDHQWLLQGWKGR 625
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC7BG011540.3 626 VLYALSTW 633
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    
VALHLSQRLP AMDATPEEFE ALSPSLFLDL PPTPPPAGDV DLDFISRMLM EEDIDDKFFY  60
QYPDQPAILD AQRPYEQIIS DTTTTSSGSP NGTTSSDGNA ATSSSEETNN SSWPYDPLDN  120
GGDMDMLNSA FLKGMEEANK FLPTNNALLE AIPDKERGFT VKKKEVVANG TPTSGNGRGR  180
KYRHDEDDDL EAETARSSKL MTPDNEETGA REMFDEIMLE EYEKCIQGIE ELRLVMDSEA  240
KKKSGKAARA KKSEAVDLRT MLVHCAQAVA AGDSRGATEL LRQIKQHSGP TGDATQRLAH  300
CFAEGLEARL AGTGSQVYQS LVAKRTSVVE FLKAYKLFMA ACCFKKANFG FANKTILNAV  360
AGKRRLHIVD FGVQYGLQWP GLMRWLAQRD GGPPEVRITG IDLPQPGFRP ARQVEETGRR  420
LSSCARELGV PFKFHGVAAK LDTVRGEDLR IDPDEVLIVH CQCGLSNLMD DSVAVTTDGG  480
PSPRDVVLRN IRDMRPDVFV EGVANGGYGA PFFVTRFREA MFFYSAHFDM LDATLPRDND  540
ERLLIERDII GRGALNVIAC EGADRVERPE TYRQWQARNR RAGLRQLPLD PEVVGMVREK  600
VREHYHKDFL VDVDHQWLLQ GWKGRVLYAL STWVAHDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-148GRAS family protein