PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG011730.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 629aa    MW: 70153.2 Da    PI: 5.1376
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG011730.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.48.6e-1092506241373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd + a++lL ++++++ p+gd++qRla++f+e+L+arla+++s++y++l +++ts   ++e l+a+klf  ++ + k 
  TRIDC7BG011730.3 250 LRTMLVHCAQAVAAGDRRGATELLRQIKQHSGPTGDATQRLAHCFAEGLEARLAGTGSQVYQSLVAKRTS---VVEFLKAYKLFMAACCFKKA 339
                       5789***************************************************************999...******************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        +  aN++Il+av+g++r+Hi+Df++++GlQWp L++ La+R++gpp++RiTgv+ p++g   ++++eetg+rL++ A+elgvpf+f+  v+ 
  TRIDC7BG011730.3 340 NFGFANKTILNAVAGKRRLHIVDFGVQYGLQWPGLMRWLAQRDGGPPEVRITGVDLPQPGfrPARQVEETGRRLSSCARELGVPFKFHG-VTA 431
                       ***********************************************************9*9***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                       r+++++ e+L ++p+E+ +V+++  l +l+d+sv+++     +rd vL+ +++++P+v+v +  +  ++++ F++rf ea+ +ysa fd+l+a
  TRIDC7BG011730.3 432 RWDTVRGEDLGIDPDEVFVVHCQCGLRNLMDDSVAVTTggpsPRDVVLRNIRDMRPDVFVECVANGAYGAPFFVTRFREAMFFYSAHFDMLDA 524
                       **********************************998878889************************************************** PP

              GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                       ++pr+++ r  +Er l+g+ + nv+acega+r+er et+++W+ r ++aG++++pl+ +++  ++  +r+++ + + ++ ++++l++gWk+r 
  TRIDC7BG011730.3 525 TIPRDNDVRLLIERDLIGPGALNVIACEGADRVERPETYRQWQVRNRRAGLRQLPLDPEVVGMVREKVREHYHKDFLIDVDHQWLLQGWKGRV 617
                       ************************************************************************888****************** PP

              GRAS 367 LvsvSaW 373
                       L+++S W
  TRIDC7BG011730.3 618 LYALSTW 624
                       ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    
TSRLPAMDAT PEEFEPLSPS LFLDLPPTPP PAADVDLDFI SRMLMEEDID DKFFYQYPDQ  60
PAILDAQRPY EQIISDTTTS SSGSPNGTTS SDGNAISSSN AATSSSEETN NSSWPYDMDM  120
LNSAFLKGME EANKFLPTNN TLLEATPGKE RGSTVKKEEA ANGTPPSGNG RGRRYRYDED  180
DLEAETTRSS KLMMPDIEET GAREMFDEIM LEGYETCMQG IEELRLAMDN EAKKKSGKAA  240
RAKKSEAVDL RTMLVHCAQA VAAGDRRGAT ELLRQIKQHS GPTGDATQRL AHCFAEGLEA  300
RLAGTGSQVY QSLVAKRTSV VEFLKAYKLF MAACCFKKAN FGFANKTILN AVAGKRRLHI  360
VDFGVQYGLQ WPGLMRWLAQ RDGGPPEVRI TGVDLPQPGF RPARQVEETG RRLSSCAREL  420
GVPFKFHGVT ARWDTVRGED LGIDPDEVFV VHCQCGLRNL MDDSVAVTTG GPSPRDVVLR  480
NIRDMRPDVF VECVANGAYG APFFVTRFRE AMFFYSAHFD MLDATIPRDN DVRLLIERDL  540
IGPGALNVIA CEGADRVERP ETYRQWQVRN RRAGLRQLPL DPEVVGMVRE KVREHYHKDF  600
LIDVDHQWLL QGWKGRVLYA LSTWVADHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-148GRAS family protein