PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG012000.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 156aa MW: 17810.3 Da PI: 8.4876

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG012000.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	69.7	2.8e-22	1	41	11	51
HHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 11 vtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 vtfskRr g++KKAeEL vLCda+va+++fsstgkl ++s TRIDC7BG012000.4 1 VTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS 41 8************************************9986 PP
2	K-box	49.1	2.4e-17	75	153	20	98
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ L++++ + +R++ Ge+L+ Ls+ eLqq+e++Le++l+++ +K++ +++qi++lq+k +l een++L++++ TRIDC7BG012000.4 75 KYDSLNEQLAEASLRLRRMRGEELDGLSVGELQQMEKNLETGLQRVLCTKDRQFMQQINDLQQKGTQLAEENMRLKNQV 153 5677777777777899***********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
VTFSKRRRGL FKKAEELAVL CDADVALVVF SSTGKLSQFA SSSMNEIIDK YSTHSKNLGK 60 SNQQPAIDLN LEHCKYDSLN EQLAEASLRL RRMRGEELDG LSVGELQQME KNLETGLQRV 120 LCTKDRQFMQ QINDLQQKGT QLAEENMRLK NQVIRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	1e-44	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG012000.4