PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG012000.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 196aa MW: 21665.2 Da PI: 4.4125

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG012000.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	31.5	2.3e-10	1	27	25	51
HHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 25 eELSvLCdaevaviifsstgklyeyss 51 eEL vLCda+va+++fsstgkl ++s TRIDC7BG012000.5 1 EELAVLCDADVALVVFSSTGKLSQFAS 27 6**********************9986 PP
2	K-box	49.2	2.3e-17	61	140	20	99
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ L++++ + +R++ Ge+L+ Ls+ eLqq+e++Le++l+++ +K++ +++qi++lq+k +l een++L++++ TRIDC7BG012000.5 61 KYDSLNEQLAEASLRLRRMRGEELDGLSVGELQQMEKNLETGLQRVLCTKDRQFMQQINDLQQKGTQLAEENMRLKNQMH 140 5677777777777899************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
EELAVLCDAD VALVVFSSTG KLSQFASSSM NEIIDKYSTH SKNLGKSNQQ PAIDLNLEHC 60 KYDSLNEQLA EASLRLRRMR GEELDGLSVG ELQQMEKNLE TGLQRVLCTK DRQFMQQIND 120 LQQKGTQLAE ENMRLKNQMH EVPTASMVAV ADADAENVVP DDVHSSDSVM TAVHSASSQD 180 NDDGSDISLK LALPWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	3e-34	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG012000.5