PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG012810.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 285aa    MW: 32872.9 Da    PI: 8.6103
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG012810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.94.4e-15481123191
              FAR1  31 rtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                       r+ vCs+eg +ee++ k   ++++rr+r+ t++gCkakl++ +++ + +w v+++  eHnH+lap
  TRIDC7BG012810.1  48 RKIVCSREGVHEEKHMKrkmEDRKRRPRSITHVGCKAKLVIARQEeTCQWFVKDFIDEHNHPLAP 112
                       6789********9998888889999******************99899**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MSQCWGTLIL PTRCLIVRMK VIYSIKNMVL RKVLVSGEAM LSGMDPLRKI VCSREGVHEE  60
KHMKRKMEDR KRRPRSITHV GCKAKLVIAR QEETCQWFVK DFIDEHNHPL APRGLSCLLS  120
SHKRISDEQK TDIAEMEKSG IRKHHIMDIL CMQYSGYDEV GCTTRDIYNF CHANKQESIA  180
SGDQSHGGAA RARFRFFFFS YLVDDVGHLK GLFWCDSQPR LEYEAFGDII VFDSTYRTNK  240
YNLPFMSFVK LSHHRGTVIF GCGIISHETS QAYEWMLQTS SDAMG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16974DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-42FAR1 family protein