PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG013660.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 393aa MW: 40739.1 Da PI: 9.1654

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG013660.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.2	4e-40	53	232	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas...nsssg.. 88 ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s + TRIDC7BG013660.2 53 PPKRTTSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSmlsT---Ipa 142 789******************************************************************999766777777663330...256 PP TCP 89 ........................................kaaksaakskksqksaasalnlakesr..akararare.rtrekmriknkln 137 +s+ + s +s + l+++ +s a + +r+ r++++m+++ +++ TRIDC7BG013660.2 143 hlraaglpgsrfgggaradawdrfvglgfggglespasttT--SSSSPLLLSFHSGSVGLDVSPSSAtaAANTELSRKrRWEQEMQQQRHQQ 232 66677888888888999999999999999999999986432..2333555555666655666664442233333366656666666665544 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MDVTGDAGGG RRPNSPLQLL EKKEEHPCSI SPAAGLGTNG SATGELQVRK AAPPKRTTSK 60 DRHTKVDGRG RRIRMPAICA ARVFQLTREL GHKTDGETIE WLLQQAEPAV IAATGTGTIP 120 ANFTSLNISL RSSGSMLSTI PAHLRAAGLP GSRFGGGARA DAWDRFVGLG FGGGLESPAS 180 TTTSSSSPLL LSFHSGSVGL DVSPSSATAA ANTELSRKRR WEQEMQQQRH QQQQQQQYQQ 240 QMAGYTQSQM PGTVWMVPTS HAQGAGAAPA GGGESIWTFP QPGSGGGGSA TVYRGVPSGL 300 HFMNIPAPMA VHAQQLGLGQ AGGGGSAAAG EGHMGILAAL NAYRGQHASA LEVTVAGHNG 360 AAEGTTHHQH QNQHQHLQHG GGEPNESMST SDS

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MDVTGDAGGG RRPNSPLQLL EKKEEHPCSI SPAAGLGTNG SATGELQVRK AAPPKRTTSK  60
DRHTKVDGRG RRIRMPAICA ARVFQLTREL GHKTDGETIE WLLQQAEPAV IAATGTGTIP  120
ANFTSLNISL RSSGSMLSTI PAHLRAAGLP GSRFGGGARA DAWDRFVGLG FGGGLESPAS  180
TTTSSSSPLL LSFHSGSVGL DVSPSSATAA ANTELSRKRR WEQEMQQQRH QQQQQQQYQQ  240
QMAGYTQSQM PGTVWMVPTS HAQGAGAAPA GGGESIWTFP QPGSGGGGSA TVYRGVPSGL  300
HFMNIPAPMA VHAQQLGLGQ AGGGGSAAAG EGHMGILAAL NAYRGQHASA LEVTVAGHNG  360
AAEGTTHHQH QNQHQHLQHG GGEPNESMST SDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	5e-49	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG013660.2