PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG013860.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 202aa MW: 23018.3 Da PI: 7.2139

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG013860.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.5	5.4e-28	79	128	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++e +s+yF++pi++AA+eL+v+lTvLK++CR++GI+RWPhRk+ksl TRIDC7BG013860.4 79 RVLTFELVSQYFYMPITQAARELNVGLTVLKKRCRELGIPRWPHRKLKSL 128 6699********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
LSRRAAVYKS SHAAPCLVPC DTGELDTSFD DDLLRCWEAI EQSDNNTEES GKGLPLVCYG 60 EENGAASNAM RTDRVRSERV LTFELVSQYF YMPITQAARE LNVGLTVLKK RCRELGIPRW 120 PHRKLKSLQA LINDVEVLQE AGKANEDGQL RAMVEMLEQE RRLLEQKPYV ELEEKTKRLR 180 QACFKASYKK RRLLALEPGD AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	2e-39	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG013860.4