PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG016820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 443aa MW: 49324.7 Da PI: 4.6309

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG016820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.2	1.6e-32	71	210	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 lp+G++F+P+d+el+ + L+k+ ++ + + ++ ++e+ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + TRIDC7BG016820.1 71 LPKGVKFDPSDQELLGHLLAKHDKAGSqphpfIAEFIPtVEEAdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINtsdlaDV 162 799**********999987655444456542222223666655******.677888899**************7544455588 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k+v+ +g++ g+kk++v+y + + k++kt+Wv+h+y+l TRIDC7BG016820.1 163 RWHKTGKTKPVMI-DGQHLGCKKIMVLYmsTVKGGKPKKTNWVIHQYHL 210 9********.999*******6644666777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
RKSPPVAGHA AAAMTGTSWL IDSQRIASKI KNVSGSRDLS KQKWLSNPTK ECPNCSHVID 60 NSDVVHQWPG LPKGVKFDPS DQELLGHLLA KHDKAGSQPH PFIAEFIPTV EEADGICYTH 120 PQKLPGVKQD GSVSHFFHRT FKAYNTGTRK RRKINTSDLA DVRWHKTGKT KPVMIDGQHL 180 GCKKIMVLYM STVKGGKPKK TNWVIHQYHL GTGEDEQNEE YVVSKLFFQQ QNGEKSALEL 240 TNTDVMETTV AVADLTDLPE PTAEEDDERI SSISNQEVLL NNEYNADEEA LHSHEHNTYQ 300 ENGDCEINME EKAADENAIY PSSEKPEDGD NPPSQDPNLW EGDSQFLLDS QQLAENLAIC 360 DEFLQSQTSC GDGDEPGLIK PRLAVYAQLP VEDLKKDLQE CKDLGPSDNA ILEPENNAEL 420 RLSQLEFSQD SYTMGIFTGQ VAD

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

RKSPPVAGHA AAAMTGTSWL IDSQRIASKI KNVSGSRDLS KQKWLSNPTK ECPNCSHVID  60
NSDVVHQWPG LPKGVKFDPS DQELLGHLLA KHDKAGSQPH PFIAEFIPTV EEADGICYTH  120
PQKLPGVKQD GSVSHFFHRT FKAYNTGTRK RRKINTSDLA DVRWHKTGKT KPVMIDGQHL  180
GCKKIMVLYM STVKGGKPKK TNWVIHQYHL GTGEDEQNEE YVVSKLFFQQ QNGEKSALEL  240
TNTDVMETTV AVADLTDLPE PTAEEDDERI SSISNQEVLL NNEYNADEEA LHSHEHNTYQ  300
ENGDCEINME EKAADENAIY PSSEKPEDGD NPPSQDPNLW EGDSQFLLDS QQLAENLAIC  360
DEFLQSQTSC GDGDEPGLIK PRLAVYAQLP VEDLKKDLQE CKDLGPSDNA ILEPENNAEL  420
RLSQLEFSQD SYTMGIFTGQ VAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-127	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG016820.1