PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG017890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 337aa MW: 36055.6 Da PI: 6.5109

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG017890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	153.5	3.8e-48	59	154	1	96
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdr++Pianv+rim+++lPa+akis+dake +qecvsefisfvt+ea+++c+ e+rkt+n++d++wal lGf+dyv pl+v+l++ r+ TRIDC7BG017890.1 59 VREQDRLMPIANVIRIMRRALPAHAKISDDAKEAIQECVSEFISFVTGEANERCHMEHRKTVNAEDIVWALNRLGFDDYVVPLSVFLHRMRDP 151 69*****************************************************************************************98 PP NF-YB 94 ege 96 e++ TRIDC7BG017890.1 152 EAA 154 865 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
LFNTLKQVDQ KHSTYNSISK ALNASATTCI GPWLALPMEN ADVPNGAAAP APTQATPVVR 60 EQDRLMPIAN VIRIMRRALP AHAKISDDAK EAIQECVSEF ISFVTGEANE RCHMEHRKTV 120 NAEDIVWALN RLGFDDYVVP LSVFLHRMRD PEAATGAAAA GDRRAVTSAP PRAAPPVLHA 180 MPLQAQMQQP MYAPTARVQV QNQMQRPVYA SPAPMQVQNQ VRRPMYAPPA PVQVQMQRGV 240 YAPRAPVQGY AVGITSVRAN VGGQCQVFGG ESVVAQQYYG YGYGYGQGAY GAGSSNVAAC 300 ADEESSSNGV TVPGEGTGEP EPTPAAEESQ DKPVQSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	2e-50	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG017890.1