PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG020220.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 229aa MW: 24700.8 Da PI: 5.9115

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG020220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	126.7	1.1e-39	23	123	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC++dC++apyf +eq ++f +vhk+FGasnv+k+l+++p+++r da+ +++yeA+ar+rdP+yG+vg il+lqq++++l+a TRIDC7BG020220.1 23 PCGACKFLRRKCEDDCIFAPYFGSEQgVEHFTAVHKVFGASNVSKILNQAPPHKRLDAAITICYEAKARLRDPIYGCVGDILALQQRVANLHA 115 7*********************9977************************************************************* PP DUF260 93 elallkee 100 e+a l+++ TRIDC7BG020220.1 116 EVAFLQAH 123 *99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MSGSLTSACV SIGGRPIGSS GGPCGACKFL RRKCEDDCIF APYFGSEQGV EHFTAVHKVF 60 GASNVSKILN QAPPHKRLDA AITICYEAKA RLRDPIYGCV GDILALQQRV ANLHAEVAFL 120 QAHLMTLQQP SPPPFPSPPC MPMTTEFSIS ELASLSNVPN TMELSSLFDP SMQWAFQQQH 180 QQPYDQTGEG SVGIGNTNSN GDDLQALARE LLDRQSTGST PQQPSNTQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	1e-61	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG020220.1