PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG020680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 260aa    MW: 29266.8 Da    PI: 8.3015
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG020680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.71.9e-081375656
                      S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS
          Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56
                      +ft+ ++ e+ee+ +   n  p+++ ++ LA+k            ++ +qV +WFqNrR+ ++
  TRIDC7BG020680.2 13 RFTHAEVAEMEEHLRHlnNAIPQRNVIQGLAEKFtasaaragkiPVQYKQVWNWFQNRRYSQR 75
                      69999*******999555999*********************99999*************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MGRPPSSGGP AFRFTHAEVA EMEEHLRHLN NAIPQRNVIQ GLAEKFTASA ARAGKIPVQY  60
KQVWNWFQNR RYSQRARTPR GAPPPQGKML PTGADEHHPA SFRAQGSSSS YPGSHSGKSA  120
SDGGQAEFEA KSARDGAWYD VAAFLSHRLF ETGDPEVKVR FSGFGPEEDE WINVRKCVRL  180
RSLPCEAAEC VAVLPGDLIL CFQEGKEQAL YFDARVLDAQ RRRHDVRGCR CRFLVRYDHD  240
HSEDLHPLIF ICSWPWFSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.12e-90HB-other family protein