PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG021410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 199aa MW: 21520.6 Da PI: 5.6093

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG021410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	169.5	4e-53	65	168	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd TRIDC7BG021410.1 65 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 157 89****99999**************************************************************************** PP NF-YC 91 flvdivprdel 101 flvdivprde TRIDC7BG021410.1 158 FLVDIVPRDEA 168 *******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MEPKSTTPPP PGPVLGAPVG YPPAAVYPAA APPGYPHAPA LYAPQPPPAA VAAASQQTAA 60 QQQQQLQVFW AEQYREIEAT TDFKNHNLPL ARIKKIMKAD EDVRMIAAEA PVVFARACEM 120 FILELTHRGW AHAEENKRRT LQKSDIAAAI ARTEVFDFLV DIVPRDEAKD AEAAVAAGMP 180 HPAAGMPAAD MGYYYVPQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	144	RRTLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	4e-57	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG021410.1