PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG021410.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 131aa MW: 14762.9 Da PI: 5.2454

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG021410.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	164.9	1.1e-51	1	100	5	101
NF-YC 5 fwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvd 94 fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fdflvd TRIDC7BG021410.3 1 FWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVD 93 899998889********************************************************************************** PP NF-YC 95 ivprdel 101 ivprde TRIDC7BG021410.3 94 IVPRDEA 100 ***86 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
FWAEQYREIE ATTDFKNHNL PLARIKKIMK ADEDVRMIAA EAPVVFARAC EMFILELTHR 60 GWAHAEENKR RTLQKSDIAA AIARTEVFDF LVDIVPRDEA KDAEAAVAAG MPHPAAGMPA 120 ADMGYYYVPQ Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	76	RRTLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	4e-58	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG021410.3