PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG021880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 360aa    MW: 42320.2 Da    PI: 5.608
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG021880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.59.2e-083772137
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCsk 37
                      ++Yn+YA +vGFsvrks++k++  +++i ++  vC  
  TRIDC7BG021880.1 37 DMYNAYAAKVGFSVRKSHTKRR-GDKSISQKYIVCXX 72
                      58**************998876.88889999999*76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
QVRVEKRDPS QAIDKVGETL IVPEVGLAFD SEDSAYDMYN AYAAKVGFSV RKSHTKRRGD  60
KSISQKYIVC XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXQR RVIEADRHLI GQIREAGMKP SQVYDFMVAF YGGPDKVPFS KMDCNNEIGR  180
ERKKYLESND AQTLLEYLKN KQREDPTFFY AIQIDQVDGQ IANFFWADDR SEFYFNKKWF  240
ELLDQYNLED NEWMKKLYEL REKWAAVYRD SFTADMNSTQ RSEECEKVSG SLRENELDAD  300
FSSRRKKPVA YSPNFPLLKT ASESYTRRMY SEFETEFKSQ FSFSCKLLQT DGPVLTYMVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-20FAR1 family protein