PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG022040.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 166aa MW: 18377.8 Da PI: 11.7161

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.2	3.8e-13	14	59	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEde l + v+++G++ W++I ++ + Rt+k+c++rw + TRIDC7BG022040.1 14 KGPWTAEEDEVLHQHVREHGPREWSSIRSKGLLPRTGKSCRLRWVN 59 79***********************8876677********87 PP
2	Myb_DNA-binding	44.6	3.3e-14	70	110	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++ eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w TRIDC7BG022040.1 70 KFSSEEERVVIDLQAQFGNK-WARIATYLP-GRTDNDVKNFWS 110 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MQPRGGGDRV AVRKGPWTAE EDEVLHQHVR EHGPREWSSI RSKGLLPRTG KSCRLRWVNK 60 LRPDLKTGCK FSSEEERVVI DLQAQFGNKW ARIATYLPGR TDNDVKNFWS TRQKRLARIL 120 RAPLPRRRSA SAAAKHSGGV GGVGAASSSA ASNSHEAAAA RRSPCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	2e-64	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022040.1