PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG025440.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 235aa    MW: 25589.1 Da    PI: 10.4913
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG025440.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.31.1e-30191541128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk.atgkdk 90 
                       lppGfrF+Ptdeelvv+yL++k+ + +l++  vi++v ++y+++Pwd+p    a+e e y+F+ r  + a  kr  r +t+sg Wk a+ +++
  TRIDC7BG025440.1  19 LPPGFRFRPTDEELVVQYLRRKALALPLPA-AVISDVhNLYSLDPWDIP---GAREGEKYYFAVRPAAGA--KRGGRtTTASGCWKpASARER 105
                       79****************************.89999999**********...345678999999988765..577775788*****7777899 PP

               NAM  91 evlsk...kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                       +v+++   +++lvg+kk+L+f         ++  p + +  Wvmheyrl
  TRIDC7BG025440.1 106 PVVVSrcgRSHLVGVKKSLAFVprrgkgkgSKAPPAPAQIGWVMHEYRL 154
                       999988988999**********988866433455677799*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MERTPVMVRQ GGQEVLRQLP PGFRFRPTDE ELVVQYLRRK ALALPLPAAV ISDVHNLYSL  60
DPWDIPGARE GEKYYFAVRP AAGAKRGGRT TTASGCWKPA SARERPVVVS RCGRSHLVGV  120
KKSLAFVPRR GKGKGSKAPP APAQIGWVMH EYRLALPHHH KNGCCLAEAG TQEWVVCRIF  180
QRDRSSSSSN RQTPGIHGTD AHRTMPPMPP SPSSSSSSCV TSGGSSSDLQ EEVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-30NAC family protein