PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG026740.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SRS

Protein Properties

Length: 196aa MW: 20516.4 Da PI: 9.4974

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG026740.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	118.8	7.3e-37	98	180	3	93
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklss 93 +gt+sCqdCGnqakkdC h+RCRtCCksrgfdCathvkstWvpaa+rrer++q+ + ++ +++ kr+re + s+++ t++ss TRIDC7BG026740.3 98 AGTISCQDCGNQAKKDCPHMRCRTCCKSRGFDCATHVKSTWVPAARRRERHHQQPQGQA------SAEPFKRPREG--GQPSSATPTTTSS 180 789***********************************************777666543......34455555554..2333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MAGFPLGGGG HHSRGGRDDD GSHPPGINPS SSSSAAAFLY ATTPSRGGFQ LWQGQPQPQH 60 EQQQHPFYGG ASSSIIRFAD DPAASGSSSR CGGRGSGAGT ISCQDCGNQA KKDCPHMRCR 120 TCCKSRGFDC ATHVKSTWVP AARRRERHHQ QPQGQASAEP FKRPREGGQP SSATPTTTSS 180 GTLSYSLVST GSISSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19790.1	4e-28	SRS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG026740.3