PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG026860.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 108aa MW: 12443.2 Da PI: 9.7902

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG026860.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEde+lv v+ +G g+W++ ++ g+ R++k+c++rw +yl TRIDC7BG026860.1 14 KGAWTREEDERLVAHVRAHGEGCWRSLPSAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.7	4.6e-17	67	108	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 rg+++ +Edel+v+++ +lG++ W++Ia++++ gRt++++k++w TRIDC7BG026860.1 67 RGNFSRDEDELIVKLHSLLGNK-WSLIAARLP-GRTDNEIKNYW 108 89******************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 108 aa Download sequence
MGRSPCCEKA HTNKGAWTRE EDERLVAHVR AHGEGCWRSL PSAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF SRDEDELIVK LHSLLGNKWS LIAARLPGRT DNEIKNYW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-73	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG026860.1