PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG026860.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 235aa    MW: 26647.8 Da    PI: 9.5343
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG026860.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.5e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT eEde+lv  v+ +G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC7BG026860.4 14 KGAWTREEDERLVAHVRAHGEGCWRSLPSAAGLLRCGKSCRLRWINYL 61
                      79******************************99************97 PP
2Myb_DNA-binding56.56.2e-1867111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+++ +Edel+v+++ +lG++ W++Ia++++ gRt++++k++w+++
  TRIDC7BG026860.4  67 RGNFSRDEDELIVKLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111
                       89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MGRSPCCEKA HTNKGAWTRE EDERLVAHVR AHGEGCWRSL PSAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF SRDEDELIVK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIRRKLLGRG  120
IDPVTHRPLT DATTVSFVHP AEAPKTQPVT EERKPPRCPD LNLDLCISLP FQQEEERPPA  180
RACAKPVKME QLQQGRLCFR CSILRVRGAA TECSCGSNFL GLRAGMLDFR GLEMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.12e-93MYB family protein