PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG028560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 250aa    MW: 26956 Da    PI: 6.3064
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG028560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.31.9e-16163241189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +fYn Y+ e+GF vr +ks+ + + +   +++fvC + gk+ +++++         +tr+gC a ++v +++d+ w++ + + eHnH++
  TRIDC7BG028560.2 163 EFYNLYSWETGFGVRYAKSRLNVHRK-KCMQEFVCACAGKPLQSNSR---------STRCGCPALMRVLRSDDKGWYICEHKAEHNHSV 241
                       6*****************99995555.78899********9997655.........9******************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
EAESGLVPKT HAGDLLGGGI VVVESVVASI HEGRGRSSGV ISSEPMDDSS AKEQFRVVGA  60
NLGSQNNGGS EVVGESNDMA SQETSHASMG DEGDAEGVVV NKAKASCWTR RVRIGNAPEE  120
RDANPSRVPA LEASMRAYAD NKVGTVVNPA IGTSFDTVEE AYEFYNLYSW ETGFGVRYAK  180
SRLNVHRKKC MQEFVCACAG KPLQSNSRST RCGCPALMRV LRSDDKGWYI CEHKAEHNHS  240
VSVNCMEKLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-14FAR1 family protein