PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG028560.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 205aa    MW: 22533.1 Da    PI: 6.7651
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG028560.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.91.2e-16118196189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +fYn Y+ e+GF vr +ks+ + + +   +++fvC + gk+ +++++         +tr+gC a ++v +++d+ w++ + + eHnH++
  TRIDC7BG028560.4 118 EFYNLYSWETGFGVRYAKSRLNVHRK-KCMQEFVCACAGKPLQSNSR---------STRCGCPALMRVLRSDDKGWYICEHKAEHNHSV 196
                       6*****************99995555.78899********9997655.........9******************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDDSSAKEQF RVVGANLGSQ NNGGSEVVGE SNDMASQETS HASMGDEGDA EGVVVNKAKA  60
SCWTRRVRIG NAPEERDANP SRVPALEASM RAYADNKVGT VVNPAIGTSF DTVEEAYEFY  120
NLYSWETGFG VRYAKSRLNV HRKKCMQEFV CACAGKPLQS NSRSTRCGCP ALMRVLRSDD  180
KGWYICEHKA EHNHSVSVNC MEKLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-15FAR1 family protein