PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030170.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 550aa MW: 59912.2 Da PI: 7.622

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.9	1e-28	228	284	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg+nWrKYGqK+vk+s+++rsYYrCt ++C +kkkve++ d++v+ei+Y+g+H he TRIDC7BG030170.1 228 GDGFNWRKYGQKQVKSSDNSRSYYRCTNSSCLAKKKVEHCP-DGRVTEIIYRGTHSHE 284 6**************************************.*************8 PP
2	WRKY	100.7	9e-32	396	453	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYYrCt+ gCpv+k+ve++ +d + +++tYeg+Hnh TRIDC7BG030170.1 396 SDGYRWRKYGQKIVKGNPNPRSYYRCTHDGCPVRKHVEKAPDDINNMVVTYEGKHNHG 453 8********************************************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
PSLAHLLSLT NPPTLPNPSI FPSRFELPMA DGEPEAPAED NHPFPEASSA DMEKHPPPEA 60 PEASPAETKP EKKVVTETQV KEVSKSGPKE IEKEAKVKVE KEKENVEIEA TLRPTGAGTE 120 APPILAVPML AVPCFIAPPG FAGQFAMSHQ AALASVTAQA HIQLQSPASA AYSEGLPSPF 180 PHPITPKAIR PLQQAPSVTQ GSIGRPIAER PSSSESKLQH HAAVNIVGDG FNWRKYGQKQ 240 VKSSDNSRSY YRCTNSSCLA KKKVEHCPDG RVTEIIYRGT HSHEPPQKTR FVKERSPHIY 300 VPPIGDGTLQ LVNTEIVESR TPTCKLNQSA AIENSEQQLF CSSDCEGDVG NKSEDEHRSA 360 ESQPKRRIVE ATTSNLTPVL RTVREQKIIV QAGKMSDGYR WRKYGQKIVK GNPNPRSYYR 420 CTHDGCPVRK HVEKAPDDIN NMVVTYEGKH NHGQPFRSSN ESRDESVSVI TPATTITEQP 480 STVSSTSGQK LPTSTEKAAD SESTMDTTLE LGGKKPPESA QTPRSMKINP DGLKNPLLKD 540 TSAAVPVQNN

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

PSLAHLLSLT NPPTLPNPSI FPSRFELPMA DGEPEAPAED NHPFPEASSA DMEKHPPPEA  60
PEASPAETKP EKKVVTETQV KEVSKSGPKE IEKEAKVKVE KEKENVEIEA TLRPTGAGTE  120
APPILAVPML AVPCFIAPPG FAGQFAMSHQ AALASVTAQA HIQLQSPASA AYSEGLPSPF  180
PHPITPKAIR PLQQAPSVTQ GSIGRPIAER PSSSESKLQH HAAVNIVGDG FNWRKYGQKQ  240
VKSSDNSRSY YRCTNSSCLA KKKVEHCPDG RVTEIIYRGT HSHEPPQKTR FVKERSPHIY  300
VPPIGDGTLQ LVNTEIVESR TPTCKLNQSA AIENSEQQLF CSSDCEGDVG NKSEDEHRSA  360
ESQPKRRIVE ATTSNLTPVL RTVREQKIIV QAGKMSDGYR WRKYGQKIVK GNPNPRSYYR  420
CTHDGCPVRK HVEKAPDDIN NMVVTYEGKH NHGQPFRSSN ESRDESVSVI TPATTITEQP  480
STVSSTSGQK LPTSTEKAAD SESTMDTTLE LGGKKPPESA QTPRSMKINP DGLKNPLLKD  540
TSAAVPVQNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-66	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030170.1