PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030370.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 253aa MW: 27908.1 Da PI: 4.7698

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030370.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	21.9	4.3e-07	11	42	26	55
AP2 26 g.kr.krfslgkfgtaeeAakaaiaarkkleg 55 g ++ +++lg++ t+e Aa+a++ a++k++g TRIDC7BG030370.5 11 GcHCgSSVYLGSYVTEENAARAHDLAALKYRG 42 444569************************98 PP
2	AP2	47.3	5e-15	87	140	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++k +g+W A+I e + k ++lg+f t+ eAa+a++ a+ +l+g TRIDC7BG030370.5 87 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 140 67***999.9**99953323..36******99**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MFCMGSVSTF GCHCGSSVYL GSYVTEENAA RAHDLAALKY RGITQPTKLN FNISDYAKEI 60 EIMKSMNQDE FVAYIRRQSS CFSRGTSSYR GVTRRKDGKW QARIGRIGES RDTKDIYLGT 120 FETEVEAAEA YDLAAIQLRG VHAVTNFDIS NYSEEGLKKL EGSSEVVNLE DQSEVTKLAV 180 TNLDISKHCE DGLKKLDGAS QVVNLESQSE VTKLSVTNFD ISNCCEDGLK KLEGSSEVAN 240 LEDQSEVTKL AGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	5e-53	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030370.5