PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG033650.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 345aa MW: 38002.7 Da PI: 6.4573

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG033650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv++++ +G g+W+ ++++ g+ R++k+c++rw +yl TRIDC7BG033650.1 14 RGLWSPEEDEKLVRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	55.3	1.6e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+++eE++l++ +++ G++ W+ Ia++++ gRt++++k++w+++ TRIDC7BG033650.1 67 RGRFSPEEEKLIISLHAIVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLVRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF SPEEEKLIIS LHAIVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKAP 120 AAPNVTTTTS STTSTSPPNN GLAPCSGSTA TSDVHHRRLQ HPTFSCAPAG DHLQLDAIIG 180 HHQSTSLALP VAAGAGQEDS PPGMSHHCPL FMFDTGVVST PFASAAAQQH PFIASFTAAM 240 AEADTPSCYH LPPLVDGMGA MGMCMEAMDD HCGARAGMGN GCFGDEQRQR RRPELEEEEG 300 EQLGQHEQWD EEQLLMWDDQ EVLTPSNMEA MQSGAHSLLF MGPNA

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGHHSCCNQQ KVKRGLWSPE EDEKLVRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF SPEEEKLIIS LHAIVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKAP  120
AAPNVTTTTS STTSTSPPNN GLAPCSGSTA TSDVHHRRLQ HPTFSCAPAG DHLQLDAIIG  180
HHQSTSLALP VAAGAGQEDS PPGMSHHCPL FMFDTGVVST PFASAAAQQH PFIASFTAAM  240
AEADTPSCYH LPPLVDGMGA MGMCMEAMDD HCGARAGMGN GCFGDEQRQR RRPELEEEEG  300
EQLGQHEQWD EEQLLMWDDQ EVLTPSNMEA MQSGAHSLLF MGPNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	2e-79	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG033650.1