PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG034560.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LSD
Protein Properties Length: 81aa    MW: 8541.74 Da    PI: 9.8874
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG034560.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD141.42.3e-13933125
           zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                      CggCrt+L+YP+GA+ V Ca C++V
  TRIDC7BG034560.3  9 CGGCRTTLMYPPGASTVGCATCHHV 33
                      ************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
ASQYAHLKCG GCRTTLMYPP GASTVGCATC HHVNPVRAQG SSAPPDAHAR PQTVLVENPR  60
TMNDKGKLVS NVAVGVTSWK R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20380.26e-18LSD family protein